Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852740.1_cds_XP_016511956.1_24645
CDS Infomation

[gene=LOC107829050] [db_xref=GeneID:107829050] [protein=transcription factor ABORTED MICROSPORES-like] [protein_id=XP_016511956.1] [location=complement(join(201755..201820,201951..202127,202258..202482,202562..203116,203323..203403,203516..203594,203686..203871,204122..204213))] [gbkey=CDS]
Sequence

ATGGAAAGAGCATTGGAATGGTTAAGGCCACTTGTTGATTCCAACAATTGGGAATATTGT
GTTGTTTGGAAGTTGGGTGATGACCCTTCTAGGTTTATAGAATGGATAGGATGTTGCTGT
TCTGGAGCTAAAGCAGTTGATGTCAATGTGAAGAAAGAAAATGGAGGACAGCTGACATTC
ACTACTCTGTGTAGAGATAGCCAAATTCAGCATCCTATTAGAACAAAGGCTTGTGAGGCT
TTAGCTCATTTTCCTCTTTCTATTTCCCTTTATTCTGGGATTCAGGGAGAGGTAGTAACA
TCAAATGAACCCAAGTGGATTATTCATACTGAGGTATCCAATTCAACTTTGTCACATTAC
CCTTGGCAGGAATTAAAGGGTACCCTAGTGTTGATCCCAGTTGCTGGTGGACTGGTTGAG
ATCTACAATTCAAAGCTGATATATAAAGATCAAAAGACGATTGATTTCATTATCAATCGG
TTCAAACATGGTTCAGAAAAAGCCAGTAGTTCCAGCGCAAAGAAAGAAGATCAAGCTCTT
GATTCCTTTCCCTTAGAGAAACTGAGCTTTTGTGCTCCTCTCTTACAATACACAAGTTTT
CCTTCAAGTGCACCTCTTATTTCTCAAGTATCTGAATCTAGTGCTAATCCTAGCATTCAA
GGATCACCCACTTGTTCCATTCCTTCAAATGAACTTACCTTGTGTCATTCAACTTCTGAC
AATCTGTCGCGAAACATACCTTTAAGCCAATCTAGTGACGTGTATTTTGAGCACACCGAG
CTTCAGTGCAGTGGAAACTTGTCAAGAATGGAAGGTGCTGTTTTTCCTTGGAACCAAGAA
AATTATATAATTGCAGGAGATGTCTACACAATGGGTAAGAAAAGACAGAGAGGACCTTAT
CAGTCAAAGAATCTTGTCACGGAGAGAAAACGAAGGAACAGAATTAAAGATGGTCTTTTT
GCTCTTCGAGCTCTAGTTCCCAACATTTCTAAGATGGACAAAGTTGCAATACTTGGAGAC
GCAATTGACTATATAAATGAATTGGAAGAAAATGTGAAGTTATATCAAGTTGAACTCAAT
GAATTAGCAGCAGAAGTTTCCAAGAATGAAAGTTCTGAAGTGGTTCTATCAGACATGAGT
GAAATGTCCAAAGTTACTGGACCAACAAATGAGAAAACACAAATTTCAATTAATACAACT
AAAAGGACAAGAATGGAGGGGCAAGTGGAAGTGAACCAAATTGGTGCAAGAGAGTTCTTG
TTGAAGGTCTCTGGATCACATAAACCGGGAGGATTTACTCAGTTGATGGAGGCTATGAAT
TCCTTAGGACTTGAAGTAGTAAATACGAATTTTACCACTTTTGGAGGGGAGATCTTGAGC
ATTTTCATAGCAAGGGCAAATATGCACAGAGTTGTTGAAGCACAACAGCTGAGATCCTCG
CTTATTGAGCTGACAAGTTGA

Peptide Sequence

PEP ID

XP_016511956.1
PEP Infomation

PREDICTED: transcription factor ABORTED MICROSPORES-like [Nicotiana tabacum]
Sequence

MERALEWLRPLVDSNNWEYCVVWKLGDDPSRFIEWIGCCCSGAKAVDVNVKKENGGQLTF
TTLCRDSQIQHPIRTKACEALAHFPLSISLYSGIQGEVVTSNEPKWIIHTEVSNSTLSHY
PWQELKGTLVLIPVAGGLVEIYNSKLIYKDQKTIDFIINRFKHGSEKASSSSAKKEDQAL
DSFPLEKLSFCAPLLQYTSFPSSAPLISQVSESSANPSIQGSPTCSIPSNELTLCHSTSD
NLSRNIPLSQSSDVYFEHTELQCSGNLSRMEGAVFPWNQENYIIAGDVYTMGKKRQRGPY
QSKNLVTERKRRNRIKDGLFALRALVPNISKMDKVAILGDAIDYINELEENVKLYQVELN
ELAAEVSKNESSEVVLSDMSEMSKVTGPTNEKTQISINTTKRTRMEGQVEVNQIGAREFL
LKVSGSHKPGGFTQLMEAMNSLGLEVVNTNFTTFGGEILSIFIARANMHRVVEAQQLRSS
LIELTS

Transcript Sequence

Gene sequence data has not been registered.